Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015837843.1_cds_XP_016506799.1_19991
CDS Infomation

[gene=LOC107824525] [db_xref=GeneID:107824525] [protein=protein DENND6A-like isoform X3] [protein_id=XP_016506799.1] [location=complement(join(72935..72956,73059..74656))] [gbkey=CDS]
Sequence

ATGAGCAGATCACCATCATTTTCGGTGAAATCAGAAGCTGATAATTTGAAAATAGATGAA
AAAGCTTTACAGCAGTGGGTAGTTGGGTTCTGCATCATTAGGTTTGATCTAGAACAAGGA
CAGCTCATTGAAGAATGTTACCCCTCGGGTTGTTTAACGCACAATGAGGAGCTTGAAGTT
GCATTTAGCTCATTTCCGGATTCTGTTTCTCAGAATCATAACCGATCAAGCATCCATGAT
TGTATCTTTTTCTTTCGTGTCCGGAGGCAGGGGAATCCTCTGCCTTCATCCGAGATAGTT
GAAGTAGATAATACTCGAGTGACAGCTACTGATAAGGTGTTAAAACACCGCAGTAGAATT
CAAACCGGGGTGAATTCTAGATATTTGTATGGTTTTGTGTTTAATAGGCAGAGACACGAT
GAAAGGCTAAAACGGGGTGGTGAGCAGAAGTCTGTGGTAATTCTTTCACACAACCCGTTT
TCTAGTGTCTTTAGACCTTTGCTGCAGATCATGGGTCCTTTGTACTTCGACATTGGAAAG
AAAGCCCTTAATTTTATTGCTGCTTATGTATCAATGTGGCCTGCTCCTGTACCTGGTCAG
TTAATGGAGCTTCCAATTGGTAATGCTACTCTTAAAGTGAACTTGCCACCTGCCCATTGT
ATGCCTTTGGATTGTGGAGTACTTTTTGAAGAGTTGGCTTCTCCAATAGCCCCGTTTCTT
CCTTCCAATCAATCAGTTCCACAAGGTCTTTTCCATGACGCAGATCTCTTTGGGACGTTT
AGGGGACTTTTAATGCAGCTTTGGAAGTTATGGGAATTGTTACTTATTGGAGAACCCATT
CTTATCATAGCGCCAACGCCACCTCAGTGTTGTGAAGCTGTTGCTGGTTTGGTTAGTTTG
GTTGCTCCGCTTCTTTGTAGCATTGATTTCAGGCCTTACTTTACTATTCATGATCCCGAT
TTTGCTCATTTAAACTCCCTTCAAGAAGGCGCTGCATTTCCTCCAATGATTTTGGGTGTG
ACCAACCTCTTTTTCTTGAAAGCCCTTCGAAGTATTCCACACGTCTTATCGGTTGGAAAT
CCTACCATGAATGCAACTCGACTGCCATTTGCTGCTAGAGCTTCAACTGGCAGAATTCCG
GTTGGACCTGAAGGACTTAGTCTTCCTAATCTTTCTTTGAGGAAGTTTGCGCCTTCAAAT
TTTTTGAATGCTATGAAATTGAGGAGAGATGGCCCACTCTGCCTGATGACTGAGCACAAG
GAAGCCATTTGGAGCAGTTATGCTCCAATTACAAAGCCAGACACTTCAATCTTGAATAGG
CTAATTGATGCAGGTTTGTCACCCAGGGTAGAGGAATCAATGTCAGTTGTTAATAATGAC
ATACTTCGTCGGCACTTCTTAGAGCTGACAACCAACTTCTTGGCCCCATTTGGCCCATAT
TATAGACCAACAACACCTTCTGAAGGATCTTCTCCATATGTTGATCCTCCTCCTCTACCC
ACATTTAATGCTGAGGACTTCCTCGCTAGCTTATCCGCAAGGGGTCCTGGGAAGTTTCTG
TTGAAGAGGATGAAATCCAACTGGCTGGACCTTTACAGATTGTCGCTTGCCTCAAAATGA

Peptide Sequence

PEP ID

XP_016506799.1
PEP Infomation

PREDICTED: protein DENND6A-like isoform X3 [Nicotiana tabacum]
Sequence

MSRSPSFSVKSEADNLKIDEKALQQWVVGFCIIRFDLEQGQLIEECYPSGCLTHNEELEV
AFSSFPDSVSQNHNRSSIHDCIFFFRVRRQGNPLPSSEIVEVDNTRVTATDKVLKHRSRI
QTGVNSRYLYGFVFNRQRHDERLKRGGEQKSVVILSHNPFSSVFRPLLQIMGPLYFDIGK
KALNFIAAYVSMWPAPVPGQLMELPIGNATLKVNLPPAHCMPLDCGVLFEELASPIAPFL
PSNQSVPQGLFHDADLFGTFRGLLMQLWKLWELLLIGEPILIIAPTPPQCCEAVAGLVSL
VAPLLCSIDFRPYFTIHDPDFAHLNSLQEGAAFPPMILGVTNLFFLKALRSIPHVLSVGN
PTMNATRLPFAARASTGRIPVGPEGLSLPNLSLRKFAPSNFLNAMKLRRDGPLCLMTEHK
EAIWSSYAPITKPDTSILNRLIDAGLSPRVEESMSVVNNDILRRHFLELTTNFLAPFGPY
YRPTTPSEGSSPYVDPPPLPTFNAEDFLASLSARGPGKFLLKRMKSNWLDLYRLSLASK

Transcript Sequence

Gene sequence data has not been registered.